dbCAN Logo

Cluster: HRGMv2_0148_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0148_97 HRGMv2_0148_97_2 773 2131 - 2.A.6.2.20
TC HRGMv2_0148_97 HRGMv2_0148_97_3 2132 5245 - 2.A.6.2.22
TC HRGMv2_0148_97 HRGMv2_0148_97_4 5242 6363 - 2.A.6.2.44
TC HRGMv2_0148_97 HRGMv2_0148_97_5 6407 7609 - 9.B.146.1.4
pfam HRGMv2_0148_97 HRGMv2_0148_97_6 7710 8282 - NusG
pfam HRGMv2_0148_97 HRGMv2_0148_97_7 8788 9996 - Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5
CAZyme HRGMv2_0148_97 HRGMv2_0148_97_8 10085 10582 - GH24
Gene ID: HRGMv2_0148_97_2
Type: TC
Location: 773 - 2131 (-)
Gene ID: HRGMv2_0148_97_3
Type: TC
Location: 2132 - 5245 (-)
Gene ID: HRGMv2_0148_97_4
Type: TC
Location: 5242 - 6363 (-)
Gene ID: HRGMv2_0148_97_5
Type: TC
Location: 6407 - 7609 (-)
Gene ID: HRGMv2_0148_97_6
Type: pfam
Location: 7710 - 8282 (-)
Gene ID: HRGMv2_0148_97_7
Type: pfam
Location: 8788 - 9996 (-)
Gene ID: HRGMv2_0148_97_8
Type: CAZyme
Location: 10085 - 10582 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0148_97_2 vegan > omnivore 1.09147 0.02341

🧭 Explore Read Mapping of CGC

← Back to Cluster List