dbCAN Logo

Cluster: HRGMv2_0148_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0148_85 HRGMv2_0148_85_2 976 4005 - 1.B.14.6.1
pfam HRGMv2_0148_85 HRGMv2_0148_85_3 4220 5866 - DUF6377
CAZyme HRGMv2_0148_85 HRGMv2_0148_85_4 6389 7402 - GH53
CAZyme HRGMv2_0148_85 HRGMv2_0148_85_5 7409 9901 - GH2
CAZyme HRGMv2_0148_85 HRGMv2_0148_85_6 9984 11081 - GH53
pfam HRGMv2_0148_85 HRGMv2_0148_85_7 11096 12544 - SusE | DUF5111 | DUF5114
TC HRGMv2_0148_85 HRGMv2_0148_85_8 12563 14134 - 8.A.46.1.1
TC HRGMv2_0148_85 HRGMv2_0148_85_9 14156 17128 - 1.B.14.6.1
Gene ID: HRGMv2_0148_85_2
Type: TC
Location: 976 - 4005 (-)
Gene ID: HRGMv2_0148_85_3
Type: pfam
Location: 4220 - 5866 (-)
Gene ID: HRGMv2_0148_85_4
Type: CAZyme
Location: 6389 - 7402 (-)
Gene ID: HRGMv2_0148_85_5
Type: CAZyme
Location: 7409 - 9901 (-)
Gene ID: HRGMv2_0148_85_6
Type: CAZyme
Location: 9984 - 11081 (-)
Gene ID: HRGMv2_0148_85_7
Type: pfam
Location: 11096 - 12544 (-)
Gene ID: HRGMv2_0148_85_8
Type: TC
Location: 12563 - 14134 (-)
Gene ID: HRGMv2_0148_85_9
Type: TC
Location: 14156 - 17128 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0148_85_2 vegetarian > vegan 2.41065 0.03630

🧭 Explore Read Mapping of CGC

← Back to Cluster List