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Cluster: HRGMv2_0148_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0148_82 HRGMv2_0148_82_7 5070 5954 - GT2
NULL(UNKNOWN) HRGMv2_0148_82 HRGMv2_0148_82_8 5958 6503 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0148_82 HRGMv2_0148_82_9 6500 7600 - GT4
TC HRGMv2_0148_82 HRGMv2_0148_82_10 7611 8645 - 9.B.97.6.3
CAZyme HRGMv2_0148_82 HRGMv2_0148_82_11 8593 9765 - GT4
pfam HRGMv2_0148_82 HRGMv2_0148_82_12 9779 10888 - Wzy_C
CAZyme HRGMv2_0148_82 HRGMv2_0148_82_13 10968 11981 - GT113
pfam HRGMv2_0148_82 HRGMv2_0148_82_14 11978 13108 - FAD_binding_2 | GLF | NAD_binding_8
NULL(UNKNOWN) HRGMv2_0148_82 HRGMv2_0148_82_15 13112 14149 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0148_82 HRGMv2_0148_82_16 14151 15122 - GT2
Gene ID: HRGMv2_0148_82_7
Type: CAZyme
Location: 5070 - 5954 (-)
Gene ID: HRGMv2_0148_82_8
Type:
Location: 5958 - 6503 (-)
Gene ID: HRGMv2_0148_82_9
Type: CAZyme
Location: 6500 - 7600 (-)
Gene ID: HRGMv2_0148_82_10
Type: TC
Location: 7611 - 8645 (-)
Gene ID: HRGMv2_0148_82_11
Type: CAZyme
Location: 8593 - 9765 (-)
Gene ID: HRGMv2_0148_82_12
Type: pfam
Location: 9779 - 10888 (-)
Gene ID: HRGMv2_0148_82_13
Type: CAZyme
Location: 10968 - 11981 (-)
Gene ID: HRGMv2_0148_82_14
Type: pfam
Location: 11978 - 13108 (-)
Gene ID: HRGMv2_0148_82_15
Type:
Location: 13112 - 14149 (-)
Gene ID: HRGMv2_0148_82_16
Type: CAZyme
Location: 14151 - 15122 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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