dbCAN Logo

Cluster: HRGMv2_0148_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0148_41 HRGMv2_0148_41_33 30787 32937 - CE12 | GH105
CAZyme HRGMv2_0148_41 HRGMv2_0148_41_34 32968 34881 - PL11_1
CAZyme HRGMv2_0148_41 HRGMv2_0148_41_35 34922 36361 - GH28
pfam HRGMv2_0148_41 HRGMv2_0148_41_36 36358 36981 - DUF4450
CAZyme HRGMv2_0148_41 HRGMv2_0148_41_37 37172 39244 + GH42
CAZyme HRGMv2_0148_41 HRGMv2_0148_41_38 39332 42589 - PL26
pfam HRGMv2_0148_41 HRGMv2_0148_41_39 42747 44843 - SusD_RagB | SusD-like_3
TC HRGMv2_0148_41 HRGMv2_0148_41_40 44862 48005 - 1.B.14.6.1
Gene ID: HRGMv2_0148_41_33
Type: CAZyme
Location: 30787 - 32937 (-)
Gene ID: HRGMv2_0148_41_34
Type: CAZyme
Location: 32968 - 34881 (-)
Gene ID: HRGMv2_0148_41_35
Type: CAZyme
Location: 34922 - 36361 (-)
Gene ID: HRGMv2_0148_41_36
Type: pfam
Location: 36358 - 36981 (-)
Gene ID: HRGMv2_0148_41_37
Type: CAZyme
Location: 37172 - 39244 (+)
Gene ID: HRGMv2_0148_41_38
Type: CAZyme
Location: 39332 - 42589 (-)
Gene ID: HRGMv2_0148_41_39
Type: pfam
Location: 42747 - 44843 (-)
Gene ID: HRGMv2_0148_41_40
Type: TC
Location: 44862 - 48005 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List