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Cluster: HRGMv2_0148_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0148_27 HRGMv2_0148_27_11 12051 13502 - 3.A.1.131.2
CAZyme HRGMv2_0148_27 HRGMv2_0148_27_12 13552 15528 - GH13_14
pfam HRGMv2_0148_27 HRGMv2_0148_27_13 15565 16134 - RuvC
pfam HRGMv2_0148_27 HRGMv2_0148_27_14 16131 16436 - DUF4286
TC HRGMv2_0148_27 HRGMv2_0148_27_15 16492 17796 - 2.A.35.1.5
TC HRGMv2_0148_27 HRGMv2_0148_27_16 17968 19686 + 4.C.1.1.4
TC HRGMv2_0148_27 HRGMv2_0148_27_17 19831 21696 - 3.A.1.120.6
Gene ID: HRGMv2_0148_27_11
Type: TC
Location: 12051 - 13502 (-)
Gene ID: HRGMv2_0148_27_12
Type: CAZyme
Location: 13552 - 15528 (-)
Gene ID: HRGMv2_0148_27_13
Type: pfam
Location: 15565 - 16134 (-)
Gene ID: HRGMv2_0148_27_14
Type: pfam
Location: 16131 - 16436 (-)
Gene ID: HRGMv2_0148_27_15
Type: TC
Location: 16492 - 17796 (-)
Gene ID: HRGMv2_0148_27_16
Type: TC
Location: 17968 - 19686 (+)
Gene ID: HRGMv2_0148_27_17
Type: TC
Location: 19831 - 21696 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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