dbCAN Logo

Cluster: HRGMv2_0148_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0148_21 HRGMv2_0148_21_1 1 1215 + GH97
TC HRGMv2_0148_21 HRGMv2_0148_21_2 1701 2189 + 1.B.14.6.1
STP HRGMv2_0148_21 HRGMv2_0148_21_3 2149 2406 - Sigma70_r2
NULL(UNKNOWN) HRGMv2_0148_21 HRGMv2_0148_21_4 2451 2693 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0148_21 HRGMv2_0148_21_5 3233 4693 - GH30_6
CAZyme HRGMv2_0148_21 HRGMv2_0148_21_6 4706 6205 - GH30_6
TC HRGMv2_0148_21 HRGMv2_0148_21_7 6256 7779 - 8.A.46.2.2
TC HRGMv2_0148_21 HRGMv2_0148_21_8 7792 11280 - 1.B.14.6.2
Gene ID: HRGMv2_0148_21_1
Type: CAZyme
Location: 1 - 1215 (+)
Gene ID: HRGMv2_0148_21_2
Type: TC
Location: 1701 - 2189 (+)
Gene ID: HRGMv2_0148_21_3
Type: STP
Location: 2149 - 2406 (-)
Gene ID: HRGMv2_0148_21_4
Type:
Location: 2451 - 2693 (+)
Gene ID: HRGMv2_0148_21_5
Type: CAZyme
Location: 3233 - 4693 (-)
Gene ID: HRGMv2_0148_21_6
Type: CAZyme
Location: 4706 - 6205 (-)
Gene ID: HRGMv2_0148_21_7
Type: TC
Location: 6256 - 7779 (-)
Gene ID: HRGMv2_0148_21_8
Type: TC
Location: 7792 - 11280 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List