dbCAN HGM

Cluster: HRGMv2_0140_CGC29

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0140_70	HRGMv2_0140_70_6	4031	5218	-	3.A.2.1.7
NULL(UNKNOWN)	HRGMv2_0140_70	HRGMv2_0140_70_7	5220	5642	-	NULL(UNKNOWN) [View Structural Homologs]
pfam	HRGMv2_0140_70	HRGMv2_0140_70_8	5751	5990	-	ATP-synt_DE_N
TC	HRGMv2_0140_70	HRGMv2_0140_70_9	5987	7534	-	3.A.2.1.7
CAZyme	HRGMv2_0140_70	HRGMv2_0140_70_10	8211	10586	+	GH31
pfam	HRGMv2_0140_70	HRGMv2_0140_70_11	10781	11539	+	OMP_b-brl_2
CAZyme	HRGMv2_0140_70	HRGMv2_0140_70_12	11939	14812	+	GH106

Gene ID: HRGMv2_0140_70_6
Type: TC
Location: 4031 - 5218 (-)

Gene ID: HRGMv2_0140_70_7
Type:
Location: 5220 - 5642 (-)

Gene ID: HRGMv2_0140_70_8
Type: pfam
Location: 5751 - 5990 (-)

Gene ID: HRGMv2_0140_70_9
Type: TC
Location: 5987 - 7534 (-)

Gene ID: HRGMv2_0140_70_10
Type: CAZyme
Location: 8211 - 10586 (+)

Gene ID: HRGMv2_0140_70_11
Type: pfam
Location: 10781 - 11539 (+)

Gene ID: HRGMv2_0140_70_12
Type: CAZyme
Location: 11939 - 14812 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0140_70_8	vegetarian > omnivore	1.34191	0.00180
HRGMv2_0140_70_10	vegetarian > omnivore	1.41465	0.00180
HRGMv2_0140_70_12	vegan > omnivore	1.20492	0.01548
HRGMv2_0140_70_12	vegetarian > omnivore	1.88555	0.00180

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0140_70_8	omnivore > flexitarian	1.92517	0.01945

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0140_70_9	UC > CD	1.47344	0.00863