Cluster: HRGMv2_0132_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0132_75 | HRGMv2_0132_75_1 | 3 | 1616 | + | 2.A.1.3.17 |
| pfam | HRGMv2_0132_75 | HRGMv2_0132_75_2 | 1863 | 3356 | - | PCMD | Calycin_like |
| CAZyme | HRGMv2_0132_75 | HRGMv2_0132_75_3 | 3756 | 5003 | + | GH5_57 |
Gene ID: HRGMv2_0132_75_1
Type: TC
Location: 3 - 1616 (+)
Type: TC
Location: 3 - 1616 (+)
Gene ID: HRGMv2_0132_75_2
Type: pfam
Location: 1863 - 3356 (-)
Type: pfam
Location: 1863 - 3356 (-)
Gene ID: HRGMv2_0132_75_3
Type: CAZyme
Location: 3756 - 5003 (+)
Type: CAZyme
Location: 3756 - 5003 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.