Cluster: HRGMv2_0132_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0132_33 | HRGMv2_0132_33_5 | 3252 | 4247 | + | 1.A.13.4.1 |
| TC | HRGMv2_0132_33 | HRGMv2_0132_33_6 | 4260 | 5279 | + | 1.A.13.4.1 |
| STP | HRGMv2_0132_33 | HRGMv2_0132_33_7 | 5561 | 6847 | + | Aminotran_1_2 |
| peptidase | HRGMv2_0132_33 | HRGMv2_0132_33_8 | 6857 | 7876 | + | S33.UPW |
| CAZyme | HRGMv2_0132_33 | HRGMv2_0132_33_9 | 8000 | 9931 | + | GH127 |
Gene ID: HRGMv2_0132_33_5
Type: TC
Location: 3252 - 4247 (+)
Type: TC
Location: 3252 - 4247 (+)
Gene ID: HRGMv2_0132_33_6
Type: TC
Location: 4260 - 5279 (+)
Type: TC
Location: 4260 - 5279 (+)
Gene ID: HRGMv2_0132_33_7
Type: STP
Location: 5561 - 6847 (+)
Type: STP
Location: 5561 - 6847 (+)
Gene ID: HRGMv2_0132_33_8
Type: peptidase
Location: 6857 - 7876 (+)
Type: peptidase
Location: 6857 - 7876 (+)
Gene ID: HRGMv2_0132_33_9
Type: CAZyme
Location: 8000 - 9931 (+)
Type: CAZyme
Location: 8000 - 9931 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0132_33_7 | vegetarian > omnivore | 1.05510 | 0.00430 |