Cluster: HRGMv2_0132_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0132
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0132_17 | HRGMv2_0132_17_13 | 14838 | 16181 | + | 9.B.145.1.2 |
| pfam | HRGMv2_0132_17 | HRGMv2_0132_17_14 | 16186 | 16971 | + | Inositol_P |
| pfam | HRGMv2_0132_17 | HRGMv2_0132_17_15 | 16968 | 17909 | + | Lip_A_acyltrans |
| CAZyme | HRGMv2_0132_17 | HRGMv2_0132_17_16 | 17906 | 18913 | + | GT27 |
Gene ID: HRGMv2_0132_17_13
Type: TC
Location: 14838 - 16181 (+)
Type: TC
Location: 14838 - 16181 (+)
Gene ID: HRGMv2_0132_17_14
Type: pfam
Location: 16186 - 16971 (+)
Type: pfam
Location: 16186 - 16971 (+)
Gene ID: HRGMv2_0132_17_15
Type: pfam
Location: 16968 - 17909 (+)
Type: pfam
Location: 16968 - 17909 (+)
Gene ID: HRGMv2_0132_17_16
Type: CAZyme
Location: 17906 - 18913 (+)
Type: CAZyme
Location: 17906 - 18913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0132_17_14 | vegetarian > omnivore | 1.11186 | 0.00430 |