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Cluster: HRGMv2_0130_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_581 718822 719676 + GT32
pfam HRGMv2_0130_1 HRGMv2_0130_1_582 719673 720731 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam HRGMv2_0130_1 HRGMv2_0130_1_583 721213 721704 - tRNA_edit
TC HRGMv2_0130_1 HRGMv2_0130_1_584 721760 724276 + 1.B.14.6.14
pfam HRGMv2_0130_1 HRGMv2_0130_1_585 724382 725041 + Hydrolase | HAD | Hydrolase_like | HAD_2
NULL(UNKNOWN) HRGMv2_0130_1 HRGMv2_0130_1_586 725050 726135 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0130_1 HRGMv2_0130_1_587 726360 726725 + 2.A.7.34.6
Gene ID: HRGMv2_0130_1_581
Type: CAZyme
Location: 718822 - 719676 (+)
Gene ID: HRGMv2_0130_1_582
Type: pfam
Location: 719673 - 720731 (+)
Gene ID: HRGMv2_0130_1_583
Type: pfam
Location: 721213 - 721704 (-)
Gene ID: HRGMv2_0130_1_584
Type: TC
Location: 721760 - 724276 (+)
Gene ID: HRGMv2_0130_1_585
Type: pfam
Location: 724382 - 725041 (+)
Gene ID: HRGMv2_0130_1_586
Type:
Location: 725050 - 726135 (-)
Gene ID: HRGMv2_0130_1_587
Type: TC
Location: 726360 - 726725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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