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Cluster: HRGMv2_0130_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0130_13 HRGMv2_0130_13_32 54468 55304 + GT2
TC HRGMv2_0130_13 HRGMv2_0130_13_33 55674 57191 + 1.C.39.13.2
pfam HRGMv2_0130_13 HRGMv2_0130_13_34 57243 58205 - Stealth_CR2 | Stealth_CR1 | Stealth_CR4
CAZyme HRGMv2_0130_13 HRGMv2_0130_13_35 58195 59088 - GT2
STP HRGMv2_0130_13 HRGMv2_0130_13_36 59092 60645 - Pyr_redox_2
pfam HRGMv2_0130_13 HRGMv2_0130_13_37 61121 62359 + BACON
TC HRGMv2_0130_13 HRGMv2_0130_13_38 62440 64068 - 8.A.46.2.1
TC HRGMv2_0130_13 HRGMv2_0130_13_39 64071 67247 - 1.B.14.6.13
Gene ID: HRGMv2_0130_13_32
Type: CAZyme
Location: 54468 - 55304 (+)
Gene ID: HRGMv2_0130_13_33
Type: TC
Location: 55674 - 57191 (+)
Gene ID: HRGMv2_0130_13_34
Type: pfam
Location: 57243 - 58205 (-)
Gene ID: HRGMv2_0130_13_35
Type: CAZyme
Location: 58195 - 59088 (-)
Gene ID: HRGMv2_0130_13_36
Type: STP
Location: 59092 - 60645 (-)
Gene ID: HRGMv2_0130_13_37
Type: pfam
Location: 61121 - 62359 (+)
Gene ID: HRGMv2_0130_13_38
Type: TC
Location: 62440 - 64068 (-)
Gene ID: HRGMv2_0130_13_39
Type: TC
Location: 64071 - 67247 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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