Cluster: HRGMv2_0130_CGC36
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0130
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0130_12 | HRGMv2_0130_12_11 | 13362 | 14312 | - | GH43_17 |
| sulfatase | HRGMv2_0130_12 | HRGMv2_0130_12_12 | 14338 | 15738 | - | S1_22 |
| NULL(UNKNOWN) | HRGMv2_0130_12 | HRGMv2_0130_12_13 | 15843 | 17789 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0130_12 | HRGMv2_0130_12_14 | 17816 | 19258 | - | 8.A.46.1.3 |
| TC | HRGMv2_0130_12 | HRGMv2_0130_12_15 | 19273 | 22446 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0130_12 | HRGMv2_0130_12_16 | 22970 | 23977 | + | GH43_17 |
| CAZyme | HRGMv2_0130_12 | HRGMv2_0130_12_17 | 23990 | 26215 | + | GH36 |
Gene ID: HRGMv2_0130_12_11
Type: CAZyme
Location: 13362 - 14312 (-)
Type: CAZyme
Location: 13362 - 14312 (-)
Gene ID: HRGMv2_0130_12_12
Type: sulfatase
Location: 14338 - 15738 (-)
Type: sulfatase
Location: 14338 - 15738 (-)
Gene ID: HRGMv2_0130_12_13
Type:
Location: 15843 - 17789 (-)
Type:
Location: 15843 - 17789 (-)
Gene ID: HRGMv2_0130_12_14
Type: TC
Location: 17816 - 19258 (-)
Type: TC
Location: 17816 - 19258 (-)
Gene ID: HRGMv2_0130_12_15
Type: TC
Location: 19273 - 22446 (-)
Type: TC
Location: 19273 - 22446 (-)
Gene ID: HRGMv2_0130_12_16
Type: CAZyme
Location: 22970 - 23977 (+)
Type: CAZyme
Location: 22970 - 23977 (+)
Gene ID: HRGMv2_0130_12_17
Type: CAZyme
Location: 23990 - 26215 (+)
Type: CAZyme
Location: 23990 - 26215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900541585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.