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Cluster: HRGMv2_0130_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0130_8 HRGMv2_0130_8_121 146434 147588 + 9.B.97.1.2
pfam HRGMv2_0130_8 HRGMv2_0130_8_122 147684 148667 + Aldo_ket_red
pfam HRGMv2_0130_8 HRGMv2_0130_8_123 148669 149079 - Na_Ala_symp
TC HRGMv2_0130_8 HRGMv2_0130_8_124 149160 151628 - 3.A.3.5.20
TF HRGMv2_0130_8 HRGMv2_0130_8_125 151691 152263 - HTH_AraC
TC HRGMv2_0130_8 HRGMv2_0130_8_126 152320 153522 - 2.A.1.35.1
CAZyme HRGMv2_0130_8 HRGMv2_0130_8_127 153633 154889 - GH177
Gene ID: HRGMv2_0130_8_121
Type: TC
Location: 146434 - 147588 (+)
Gene ID: HRGMv2_0130_8_122
Type: pfam
Location: 147684 - 148667 (+)
Gene ID: HRGMv2_0130_8_123
Type: pfam
Location: 148669 - 149079 (-)
Gene ID: HRGMv2_0130_8_124
Type: TC
Location: 149160 - 151628 (-)
Gene ID: HRGMv2_0130_8_125
Type: TF
Location: 151691 - 152263 (-)
Gene ID: HRGMv2_0130_8_126
Type: TC
Location: 152320 - 153522 (-)
Gene ID: HRGMv2_0130_8_127
Type: CAZyme
Location: 153633 - 154889 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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