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Cluster: HRGMv2_0130_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0130_7 HRGMv2_0130_7_32 39456 40505 + GT2
pfam HRGMv2_0130_7 HRGMv2_0130_7_33 40509 41000 + tRNA_edit
pfam HRGMv2_0130_7 HRGMv2_0130_7_34 41140 42507 - PseudoU_synth_2 | S4
TC HRGMv2_0130_7 HRGMv2_0130_7_35 42807 44129 + 2.A.66.1.4
CAZyme HRGMv2_0130_7 HRGMv2_0130_7_36 44230 45219 - CE8
pfam HRGMv2_0130_7 HRGMv2_0130_7_37 45465 46955 - GD_AH_second | SAF | GD_AH_C
pfam HRGMv2_0130_7 HRGMv2_0130_7_38 47026 48483 - Mannitol_dh | Mannitol_dh_C
TC HRGMv2_0130_7 HRGMv2_0130_7_39 48503 49960 - 2.A.1.14.2
Gene ID: HRGMv2_0130_7_32
Type: CAZyme
Location: 39456 - 40505 (+)
Gene ID: HRGMv2_0130_7_33
Type: pfam
Location: 40509 - 41000 (+)
Gene ID: HRGMv2_0130_7_34
Type: pfam
Location: 41140 - 42507 (-)
Gene ID: HRGMv2_0130_7_35
Type: TC
Location: 42807 - 44129 (+)
Gene ID: HRGMv2_0130_7_36
Type: CAZyme
Location: 44230 - 45219 (-)
Gene ID: HRGMv2_0130_7_37
Type: pfam
Location: 45465 - 46955 (-)
Gene ID: HRGMv2_0130_7_38
Type: pfam
Location: 47026 - 48483 (-)
Gene ID: HRGMv2_0130_7_39
Type: TC
Location: 48503 - 49960 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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