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Cluster: HRGMv2_0130_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0130_6 HRGMv2_0130_6_109 142016 145039 - 1.B.14.6.1
pfam HRGMv2_0130_6 HRGMv2_0130_6_110 145343 147232 + FAD_binding_2 | GIDA | FAD_oxidored | NAD_binding_8
CAZyme HRGMv2_0130_6 HRGMv2_0130_6_111 147351 149090 - GH123
pfam HRGMv2_0130_6 HRGMv2_0130_6_112 149152 150405 - Mur_ligase | Mur_ligase_C | Mur_ligase_M
CAZyme HRGMv2_0130_6 HRGMv2_0130_6_113 150822 151811 + GH43_31
pfam HRGMv2_0130_6 HRGMv2_0130_6_114 151848 154949 + DUF5107
CAZyme HRGMv2_0130_6 HRGMv2_0130_6_115 154987 156765 + GH123
TC HRGMv2_0130_6 HRGMv2_0130_6_116 156789 159926 + 1.B.14.6.1
Gene ID: HRGMv2_0130_6_109
Type: TC
Location: 142016 - 145039 (-)
Gene ID: HRGMv2_0130_6_110
Type: pfam
Location: 145343 - 147232 (+)
Gene ID: HRGMv2_0130_6_111
Type: CAZyme
Location: 147351 - 149090 (-)
Gene ID: HRGMv2_0130_6_112
Type: pfam
Location: 149152 - 150405 (-)
Gene ID: HRGMv2_0130_6_113
Type: CAZyme
Location: 150822 - 151811 (+)
Gene ID: HRGMv2_0130_6_114
Type: pfam
Location: 151848 - 154949 (+)
Gene ID: HRGMv2_0130_6_115
Type: CAZyme
Location: 154987 - 156765 (+)
Gene ID: HRGMv2_0130_6_116
Type: TC
Location: 156789 - 159926 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0130_6_110 vegetarian > vegan 1.62940 0.00000

🧭 Explore Read Mapping of CGC

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