dbCAN Logo

Cluster: HRGMv2_0130_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0130_6 HRGMv2_0130_6_10 9615 11339 + GT83
pfam HRGMv2_0130_6 HRGMv2_0130_6_11 11336 11704 + GtrA_DPMS_TM
CAZyme HRGMv2_0130_6 HRGMv2_0130_6_12 11729 12448 - GT2
pfam HRGMv2_0130_6 HRGMv2_0130_6_13 12610 13050 + Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
NULL(UNKNOWN) HRGMv2_0130_6 HRGMv2_0130_6_14 13047 15707 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0130_6 HRGMv2_0130_6_15 15713 16630 + 2.A.124.1.2
NULL(UNKNOWN) HRGMv2_0130_6 HRGMv2_0130_6_16 17927 18211 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0130_6 HRGMv2_0130_6_17 18428 19606 - 2.A.1.60.3
Gene ID: HRGMv2_0130_6_10
Type: CAZyme
Location: 9615 - 11339 (+)
Gene ID: HRGMv2_0130_6_11
Type: pfam
Location: 11336 - 11704 (+)
Gene ID: HRGMv2_0130_6_12
Type: CAZyme
Location: 11729 - 12448 (-)
Gene ID: HRGMv2_0130_6_13
Type: pfam
Location: 12610 - 13050 (+)
Gene ID: HRGMv2_0130_6_14
Type:
Location: 13047 - 15707 (+)
Gene ID: HRGMv2_0130_6_15
Type: TC
Location: 15713 - 16630 (+)
Gene ID: HRGMv2_0130_6_16
Type:
Location: 17927 - 18211 (-)
Gene ID: HRGMv2_0130_6_17
Type: TC
Location: 18428 - 19606 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List