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Cluster: HRGMv2_0130_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0130_2 HRGMv2_0130_2_177 247768 250956 - 1.B.14.6.2
NULL(UNKNOWN) HRGMv2_0130_2 HRGMv2_0130_2_178 250940 251056 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0130_2 HRGMv2_0130_2_179 251114 252418 - GH105
CAZyme HRGMv2_0130_2 HRGMv2_0130_2_180 252431 253627 - GH105
CAZyme HRGMv2_0130_2 HRGMv2_0130_2_181 253675 255078 - GH43_26
sulfatase HRGMv2_0130_2 HRGMv2_0130_2_182 255081 256955 - S1_24
CAZyme HRGMv2_0130_2 HRGMv2_0130_2_183 256952 259678 - GH2
CAZyme HRGMv2_0130_2 HRGMv2_0130_2_184 259693 261384 - GH182
Gene ID: HRGMv2_0130_2_177
Type: TC
Location: 247768 - 250956 (-)
Gene ID: HRGMv2_0130_2_178
Type:
Location: 250940 - 251056 (-)
Gene ID: HRGMv2_0130_2_179
Type: CAZyme
Location: 251114 - 252418 (-)
Gene ID: HRGMv2_0130_2_180
Type: CAZyme
Location: 252431 - 253627 (-)
Gene ID: HRGMv2_0130_2_181
Type: CAZyme
Location: 253675 - 255078 (-)
Gene ID: HRGMv2_0130_2_182
Type: sulfatase
Location: 255081 - 256955 (-)
Gene ID: HRGMv2_0130_2_183
Type: CAZyme
Location: 256952 - 259678 (-)
Gene ID: HRGMv2_0130_2_184
Type: CAZyme
Location: 259693 - 261384 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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