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Cluster: HRGMv2_0130_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_32 43145 45340 + GH3
NULL(UNKNOWN) HRGMv2_0130_1 HRGMv2_0130_1_33 45553 46974 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0130_1 HRGMv2_0130_1_34 46979 47683 + TP_methylase
TC HRGMv2_0130_1 HRGMv2_0130_1_35 47704 49089 + 9.B.145.1.2
pfam HRGMv2_0130_1 HRGMv2_0130_1_36 49104 50024 + Lip_A_acyltrans
CAZyme HRGMv2_0130_1 HRGMv2_0130_1_37 50011 51027 + GT27
NULL(UNKNOWN) HRGMv2_0130_1 HRGMv2_0130_1_38 51108 51950 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0130_1 HRGMv2_0130_1_39 51951 53171 - 2.A.21.9.2
Gene ID: HRGMv2_0130_1_32
Type: CAZyme
Location: 43145 - 45340 (+)
Gene ID: HRGMv2_0130_1_33
Type:
Location: 45553 - 46974 (+)
Gene ID: HRGMv2_0130_1_34
Type: pfam
Location: 46979 - 47683 (+)
Gene ID: HRGMv2_0130_1_35
Type: TC
Location: 47704 - 49089 (+)
Gene ID: HRGMv2_0130_1_36
Type: pfam
Location: 49104 - 50024 (+)
Gene ID: HRGMv2_0130_1_37
Type: CAZyme
Location: 50011 - 51027 (+)
Gene ID: HRGMv2_0130_1_38
Type:
Location: 51108 - 51950 (+)
Gene ID: HRGMv2_0130_1_39
Type: TC
Location: 51951 - 53171 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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