Cluster: HRGMv2_0128_CGC36
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0128
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0128_29 | HRGMv2_0128_29_15 | 13746 | 14600 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_0128_29 | HRGMv2_0128_29_16 | 14602 | 15837 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0128_29 | HRGMv2_0128_29_17 | 15867 | 16838 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_0128_29 | HRGMv2_0128_29_18 | 16835 | 18163 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0128_29 | HRGMv2_0128_29_19 | 18167 | 18295 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0128_29 | HRGMv2_0128_29_20 | 19146 | 20414 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_0128_29 | HRGMv2_0128_29_21 | 20380 | 21489 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0128_29 | HRGMv2_0128_29_22 | 21491 | 22579 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_0128_29 | HRGMv2_0128_29_23 | 22455 | 23081 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0128_29 | HRGMv2_0128_29_24 | 23142 | 24209 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_0128_29 | HRGMv2_0128_29_25 | 24500 | 24589 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0128_29 | HRGMv2_0128_29_26 | 24896 | 25777 | - | 3.A.2.1.1 |
| TC | HRGMv2_0128_29 | HRGMv2_0128_29_27 | 25793 | 27379 | - | 3.A.2.1.4 |
Gene ID: HRGMv2_0128_29_15
Type: CAZyme
Location: 13746 - 14600 (+)
Type: CAZyme
Location: 13746 - 14600 (+)
Gene ID: HRGMv2_0128_29_16
Type:
Location: 14602 - 15837 (+)
Type:
Location: 14602 - 15837 (+)
Gene ID: HRGMv2_0128_29_17
Type: CAZyme
Location: 15867 - 16838 (+)
Type: CAZyme
Location: 15867 - 16838 (+)
Gene ID: HRGMv2_0128_29_18
Type:
Location: 16835 - 18163 (+)
Type:
Location: 16835 - 18163 (+)
Gene ID: HRGMv2_0128_29_19
Type:
Location: 18167 - 18295 (+)
Type:
Location: 18167 - 18295 (+)
Gene ID: HRGMv2_0128_29_20
Type: CAZyme
Location: 19146 - 20414 (+)
Type: CAZyme
Location: 19146 - 20414 (+)
Gene ID: HRGMv2_0128_29_21
Type:
Location: 20380 - 21489 (+)
Type:
Location: 20380 - 21489 (+)
Gene ID: HRGMv2_0128_29_22
Type: CAZyme
Location: 21491 - 22579 (+)
Type: CAZyme
Location: 21491 - 22579 (+)
Gene ID: HRGMv2_0128_29_23
Type:
Location: 22455 - 23081 (-)
Type:
Location: 22455 - 23081 (-)
Gene ID: HRGMv2_0128_29_24
Type: CAZyme
Location: 23142 - 24209 (+)
Type: CAZyme
Location: 23142 - 24209 (+)
Gene ID: HRGMv2_0128_29_25
Type:
Location: 24500 - 24589 (-)
Type:
Location: 24500 - 24589 (-)
Gene ID: HRGMv2_0128_29_26
Type: TC
Location: 24896 - 25777 (-)
Type: TC
Location: 24896 - 25777 (-)
Gene ID: HRGMv2_0128_29_27
Type: TC
Location: 25793 - 27379 (-)
Type: TC
Location: 25793 - 27379 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
UBA6398
Species
UBA6398 sp900550635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.