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Cluster: HRGMv2_0128_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0128_27 HRGMv2_0128_27_20 23893 25908 - 2.A.72.1.3
pfam HRGMv2_0128_27 HRGMv2_0128_27_21 26417 27493 + NTP_transferase | NTP_transf_3
pfam HRGMv2_0128_27 HRGMv2_0128_27_22 28014 28460 - LMWPc
TC HRGMv2_0128_27 HRGMv2_0128_27_23 28491 29684 - 2.A.1.36.3
TC HRGMv2_0128_27 HRGMv2_0128_27_24 29701 30027 - 2.A.7.1.4
STP HRGMv2_0128_27 HRGMv2_0128_27_25 30184 30747 + cNMP_binding
CAZyme HRGMv2_0128_27 HRGMv2_0128_27_26 31388 32407 + GH43_3
pfam HRGMv2_0128_27 HRGMv2_0128_27_27 32588 33820 + RmuC
TC HRGMv2_0128_27 HRGMv2_0128_27_28 34048 35490 - 2.A.1.14.7
Gene ID: HRGMv2_0128_27_20
Type: TC
Location: 23893 - 25908 (-)
Gene ID: HRGMv2_0128_27_21
Type: pfam
Location: 26417 - 27493 (+)
Gene ID: HRGMv2_0128_27_22
Type: pfam
Location: 28014 - 28460 (-)
Gene ID: HRGMv2_0128_27_23
Type: TC
Location: 28491 - 29684 (-)
Gene ID: HRGMv2_0128_27_24
Type: TC
Location: 29701 - 30027 (-)
Gene ID: HRGMv2_0128_27_25
Type: STP
Location: 30184 - 30747 (+)
Gene ID: HRGMv2_0128_27_26
Type: CAZyme
Location: 31388 - 32407 (+)
Gene ID: HRGMv2_0128_27_27
Type: pfam
Location: 32588 - 33820 (+)
Gene ID: HRGMv2_0128_27_28
Type: TC
Location: 34048 - 35490 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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