Cluster: HRGMv2_0128_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0128
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0128_25 | HRGMv2_0128_25_22 | 26420 | 28966 | + | GH31_15 |
| pfam | HRGMv2_0128_25 | HRGMv2_0128_25_23 | 29295 | 30185 | + | Lactamase_B |
| NULL(UNKNOWN) | HRGMv2_0128_25 | HRGMv2_0128_25_24 | 30456 | 31133 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0128_25 | HRGMv2_0128_25_25 | 31212 | 33158 | + | 3.D.10.1.5 |
| TC | HRGMv2_0128_25 | HRGMv2_0128_25_26 | 33188 | 33946 | + | 3.D.10.1.5 |
| TC | HRGMv2_0128_25 | HRGMv2_0128_25_27 | 34452 | 35027 | - | 2.A.51.1.6 |
Gene ID: HRGMv2_0128_25_22
Type: CAZyme
Location: 26420 - 28966 (+)
Type: CAZyme
Location: 26420 - 28966 (+)
Gene ID: HRGMv2_0128_25_23
Type: pfam
Location: 29295 - 30185 (+)
Type: pfam
Location: 29295 - 30185 (+)
Gene ID: HRGMv2_0128_25_24
Type:
Location: 30456 - 31133 (+)
Type:
Location: 30456 - 31133 (+)
Gene ID: HRGMv2_0128_25_25
Type: TC
Location: 31212 - 33158 (+)
Type: TC
Location: 31212 - 33158 (+)
Gene ID: HRGMv2_0128_25_26
Type: TC
Location: 33188 - 33946 (+)
Type: TC
Location: 33188 - 33946 (+)
Gene ID: HRGMv2_0128_25_27
Type: TC
Location: 34452 - 35027 (-)
Type: TC
Location: 34452 - 35027 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
UBA6398
Species
UBA6398 sp900550635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.