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Cluster: HRGMv2_0128_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0128_13 HRGMv2_0128_13_5 3086 3988 + GH16_3
NULL(UNKNOWN) HRGMv2_0128_13 HRGMv2_0128_13_6 3990 5519 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0128_13 HRGMv2_0128_13_7 5697 5921 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0128_13 HRGMv2_0128_13_8 5843 7552 - 2.A.81.1.2
pfam HRGMv2_0128_13 HRGMv2_0128_13_9 7946 10132 - WG_beta_rep | WG_beta_rep | WG_beta_rep
STP HRGMv2_0128_13 HRGMv2_0128_13_10 10664 12202 + Fer4 | Fer4
TC HRGMv2_0128_13 HRGMv2_0128_13_11 12243 13643 + 8.A.5.1.5
Gene ID: HRGMv2_0128_13_5
Type: CAZyme
Location: 3086 - 3988 (+)
Gene ID: HRGMv2_0128_13_6
Type:
Location: 3990 - 5519 (+)
Gene ID: HRGMv2_0128_13_7
Type:
Location: 5697 - 5921 (+)
Gene ID: HRGMv2_0128_13_8
Type: TC
Location: 5843 - 7552 (-)
Gene ID: HRGMv2_0128_13_9
Type: pfam
Location: 7946 - 10132 (-)
Gene ID: HRGMv2_0128_13_10
Type: STP
Location: 10664 - 12202 (+)
Gene ID: HRGMv2_0128_13_11
Type: TC
Location: 12243 - 13643 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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