dbCAN Logo

Cluster: HRGMv2_0113_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0113_2 HRGMv2_0113_2_176 199920 201347 + 2.A.3.7.1
pfam HRGMv2_0113_2 HRGMv2_0113_2_177 201522 202295 - TraX
pfam HRGMv2_0113_2 HRGMv2_0113_2_178 202369 203106 - Hydrolase | HAD | Hydrolase_like | HAD_2
CAZyme HRGMv2_0113_2 HRGMv2_0113_2_179 203109 205100 - GH13_14
TC HRGMv2_0113_2 HRGMv2_0113_2_180 205158 206057 - 3.A.1.1.27
TC HRGMv2_0113_2 HRGMv2_0113_2_181 206054 207457 - 3.A.1.1.27
STP HRGMv2_0113_2 HRGMv2_0113_2_182 207700 208941 - SBP_bac_1
CAZyme HRGMv2_0113_2 HRGMv2_0113_2_183 209150 210766 + GH13_44
Gene ID: HRGMv2_0113_2_176
Type: TC
Location: 199920 - 201347 (+)
Gene ID: HRGMv2_0113_2_177
Type: pfam
Location: 201522 - 202295 (-)
Gene ID: HRGMv2_0113_2_178
Type: pfam
Location: 202369 - 203106 (-)
Gene ID: HRGMv2_0113_2_179
Type: CAZyme
Location: 203109 - 205100 (-)
Gene ID: HRGMv2_0113_2_180
Type: TC
Location: 205158 - 206057 (-)
Gene ID: HRGMv2_0113_2_181
Type: TC
Location: 206054 - 207457 (-)
Gene ID: HRGMv2_0113_2_182
Type: STP
Location: 207700 - 208941 (-)
Gene ID: HRGMv2_0113_2_183
Type: CAZyme
Location: 209150 - 210766 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List