dbCAN Logo

Cluster: HRGMv2_0113_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0113_11 HRGMv2_0113_11_3 2425 4245 - GH13_31
TC HRGMv2_0113_11 HRGMv2_0113_11_4 4526 5398 - 3.A.1.1.28
TC HRGMv2_0113_11 HRGMv2_0113_11_5 5417 6331 - 3.A.1.1.28
STP HRGMv2_0113_11 HRGMv2_0113_11_6 6346 7545 - SBP_bac_1
pfam HRGMv2_0113_11 HRGMv2_0113_11_7 8007 9206 + ROK
CAZyme HRGMv2_0113_11 HRGMv2_0113_11_8 9311 11602 - GH36
TC HRGMv2_0113_11 HRGMv2_0113_11_9 12038 12901 + 2.A.102.4.5
pfam HRGMv2_0113_11 HRGMv2_0113_11_10 12986 13510 - dCMP_cyt_deam_1 | MafB19-deam
TC HRGMv2_0113_11 HRGMv2_0113_11_11 13580 15652 + 2.A.36.3.1
Gene ID: HRGMv2_0113_11_3
Type: CAZyme
Location: 2425 - 4245 (-)
Gene ID: HRGMv2_0113_11_4
Type: TC
Location: 4526 - 5398 (-)
Gene ID: HRGMv2_0113_11_5
Type: TC
Location: 5417 - 6331 (-)
Gene ID: HRGMv2_0113_11_6
Type: STP
Location: 6346 - 7545 (-)
Gene ID: HRGMv2_0113_11_7
Type: pfam
Location: 8007 - 9206 (+)
Gene ID: HRGMv2_0113_11_8
Type: CAZyme
Location: 9311 - 11602 (-)
Gene ID: HRGMv2_0113_11_9
Type: TC
Location: 12038 - 12901 (+)
Gene ID: HRGMv2_0113_11_10
Type: pfam
Location: 12986 - 13510 (-)
Gene ID: HRGMv2_0113_11_11
Type: TC
Location: 13580 - 15652 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List