Cluster: HRGMv2_0113_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0113
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0113_5 | HRGMv2_0113_5_32 | 37293 | 38579 | - | 1.A.11.1.3 |
| TC | HRGMv2_0113_5 | HRGMv2_0113_5_33 | 38795 | 40036 | - | 3.A.5.2.2 |
| STP | HRGMv2_0113_5 | HRGMv2_0113_5_34 | 40179 | 40931 | + | TetR_N |
| CAZyme | HRGMv2_0113_5 | HRGMv2_0113_5_35 | 40969 | 42003 | + | GT2 |
Gene ID: HRGMv2_0113_5_32
Type: TC
Location: 37293 - 38579 (-)
Type: TC
Location: 37293 - 38579 (-)
Gene ID: HRGMv2_0113_5_33
Type: TC
Location: 38795 - 40036 (-)
Type: TC
Location: 38795 - 40036 (-)
Gene ID: HRGMv2_0113_5_34
Type: STP
Location: 40179 - 40931 (+)
Type: STP
Location: 40179 - 40931 (+)
Gene ID: HRGMv2_0113_5_35
Type: CAZyme
Location: 40969 - 42003 (+)
Type: CAZyme
Location: 40969 - 42003 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium merycicum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.