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Cluster: HRGMv2_0113_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0113_4 HRGMv2_0113_4_59 94765 96678 - GH32
TF HRGMv2_0113_4 HRGMv2_0113_4_60 96747 97835 - LacI
TC HRGMv2_0113_4 HRGMv2_0113_4_61 97871 98539 - 9.B.28.1.10
TC HRGMv2_0113_4 HRGMv2_0113_4_62 98556 99494 - 3.A.1.1.29
TC HRGMv2_0113_4 HRGMv2_0113_4_63 99507 100481 - 3.A.1.1.10
TC HRGMv2_0113_4 HRGMv2_0113_4_64 100587 102194 - 3.A.1.1.10
TC HRGMv2_0113_4 HRGMv2_0113_4_65 102811 104178 - 2.A.1.3.30
TC HRGMv2_0113_4 HRGMv2_0113_4_66 104504 105487 + 9.B.126.1.2
Gene ID: HRGMv2_0113_4_59
Type: CAZyme
Location: 94765 - 96678 (-)
Gene ID: HRGMv2_0113_4_60
Type: TF
Location: 96747 - 97835 (-)
Gene ID: HRGMv2_0113_4_61
Type: TC
Location: 97871 - 98539 (-)
Gene ID: HRGMv2_0113_4_62
Type: TC
Location: 98556 - 99494 (-)
Gene ID: HRGMv2_0113_4_63
Type: TC
Location: 99507 - 100481 (-)
Gene ID: HRGMv2_0113_4_64
Type: TC
Location: 100587 - 102194 (-)
Gene ID: HRGMv2_0113_4_65
Type: TC
Location: 102811 - 104178 (-)
Gene ID: HRGMv2_0113_4_66
Type: TC
Location: 104504 - 105487 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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