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Cluster: HRGMv2_0113_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0113_3 HRGMv2_0113_3_207 206202 208067 - 1.A.33.1.4
CAZyme HRGMv2_0113_3 HRGMv2_0113_3_208 208476 210647 + GH77
TF HRGMv2_0113_3 HRGMv2_0113_3_209 210768 211814 + LacI
TC HRGMv2_0113_3 HRGMv2_0113_3_210 211985 212692 - 9.B.28.1.3
TC HRGMv2_0113_3 HRGMv2_0113_3_211 212966 213808 - 3.A.1.1.45
TC HRGMv2_0113_3 HRGMv2_0113_3_212 213808 214662 - 3.A.1.1.45
TF HRGMv2_0113_3 HRGMv2_0113_3_213 215025 216044 + LacI
TC HRGMv2_0113_3 HRGMv2_0113_3_214 216365 217693 - 3.A.1.1.45
Gene ID: HRGMv2_0113_3_207
Type: TC
Location: 206202 - 208067 (-)
Gene ID: HRGMv2_0113_3_208
Type: CAZyme
Location: 208476 - 210647 (+)
Gene ID: HRGMv2_0113_3_209
Type: TF
Location: 210768 - 211814 (+)
Gene ID: HRGMv2_0113_3_210
Type: TC
Location: 211985 - 212692 (-)
Gene ID: HRGMv2_0113_3_211
Type: TC
Location: 212966 - 213808 (-)
Gene ID: HRGMv2_0113_3_212
Type: TC
Location: 213808 - 214662 (-)
Gene ID: HRGMv2_0113_3_213
Type: TF
Location: 215025 - 216044 (+)
Gene ID: HRGMv2_0113_3_214
Type: TC
Location: 216365 - 217693 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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