dbCAN Logo

Cluster: HRGMv2_0107_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0107_2 HRGMv2_0107_2_139 161626 162447 - 3.A.1.2.24
TF HRGMv2_0107_2 HRGMv2_0107_2_140 162506 163678 - 0040266
TC HRGMv2_0107_2 HRGMv2_0107_2_141 164238 165392 + 3.A.1.2.22
TC HRGMv2_0107_2 HRGMv2_0107_2_142 165661 167208 + 3.A.1.2.22
TC HRGMv2_0107_2 HRGMv2_0107_2_143 167210 168439 + 3.A.1.2.22
CAZyme HRGMv2_0107_2 HRGMv2_0107_2_144 168879 171875 + GH3
CAZyme HRGMv2_0107_2 HRGMv2_0107_2_145 172089 174554 + GH3
pfam HRGMv2_0107_2 HRGMv2_0107_2_146 174547 175182 + GtrA_DPMS_TM
CAZyme HRGMv2_0107_2 HRGMv2_0107_2_147 175286 176320 + GT2
Gene ID: HRGMv2_0107_2_139
Type: TC
Location: 161626 - 162447 (-)
Gene ID: HRGMv2_0107_2_140
Type: TF
Location: 162506 - 163678 (-)
Gene ID: HRGMv2_0107_2_141
Type: TC
Location: 164238 - 165392 (+)
Gene ID: HRGMv2_0107_2_142
Type: TC
Location: 165661 - 167208 (+)
Gene ID: HRGMv2_0107_2_143
Type: TC
Location: 167210 - 168439 (+)
Gene ID: HRGMv2_0107_2_144
Type: CAZyme
Location: 168879 - 171875 (+)
Gene ID: HRGMv2_0107_2_145
Type: CAZyme
Location: 172089 - 174554 (+)
Gene ID: HRGMv2_0107_2_146
Type: pfam
Location: 174547 - 175182 (+)
Gene ID: HRGMv2_0107_2_147
Type: CAZyme
Location: 175286 - 176320 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List