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Cluster: HRGMv2_0107_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0107_10 HRGMv2_0107_10_216 236320 238974 - 3.A.1.125.3
TC HRGMv2_0107_10 HRGMv2_0107_10_217 239004 239753 - 3.A.1.125.3
STP HRGMv2_0107_10 HRGMv2_0107_10_218 240009 240908 + PfkB
CAZyme HRGMv2_0107_10 HRGMv2_0107_10_219 241306 243192 - GH32 | GH32
TF HRGMv2_0107_10 HRGMv2_0107_10_220 243215 244270 - LacI
pfam HRGMv2_0107_10 HRGMv2_0107_10_221 244327 244992 - DUF624
TC HRGMv2_0107_10 HRGMv2_0107_10_222 245034 246005 - 3.A.1.1.10
TC HRGMv2_0107_10 HRGMv2_0107_10_223 246015 246968 - 3.A.1.1.10
TC HRGMv2_0107_10 HRGMv2_0107_10_224 247128 248735 - 3.A.1.1.10
Gene ID: HRGMv2_0107_10_216
Type: TC
Location: 236320 - 238974 (-)
Gene ID: HRGMv2_0107_10_217
Type: TC
Location: 239004 - 239753 (-)
Gene ID: HRGMv2_0107_10_218
Type: STP
Location: 240009 - 240908 (+)
Gene ID: HRGMv2_0107_10_219
Type: CAZyme
Location: 241306 - 243192 (-)
Gene ID: HRGMv2_0107_10_220
Type: TF
Location: 243215 - 244270 (-)
Gene ID: HRGMv2_0107_10_221
Type: pfam
Location: 244327 - 244992 (-)
Gene ID: HRGMv2_0107_10_222
Type: TC
Location: 245034 - 246005 (-)
Gene ID: HRGMv2_0107_10_223
Type: TC
Location: 246015 - 246968 (-)
Gene ID: HRGMv2_0107_10_224
Type: TC
Location: 247128 - 248735 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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