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Cluster: HRGMv2_0107_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0107_8 HRGMv2_0107_8_48 60349 61905 + GH51_1
STP HRGMv2_0107_8 HRGMv2_0107_8_49 61957 63330 + SBP_bac_1
TC HRGMv2_0107_8 HRGMv2_0107_8_50 63463 64368 + 3.A.1.1.48
TC HRGMv2_0107_8 HRGMv2_0107_8_51 64370 65248 + 3.A.1.1.48
TF HRGMv2_0107_8 HRGMv2_0107_8_52 65411 66481 + LacI
pfam HRGMv2_0107_8 HRGMv2_0107_8_53 66590 66901 - CRS1_YhbY
TC HRGMv2_0107_8 HRGMv2_0107_8_54 67003 68484 + 2.A.3.3.22
pfam HRGMv2_0107_8 HRGMv2_0107_8_55 68789 69259 - HGSNAT_cat
pfam HRGMv2_0107_8 HRGMv2_0107_8_56 69238 69630 - Glutaredoxin | ArsC
TC HRGMv2_0107_8 HRGMv2_0107_8_57 69643 69978 - 2.A.78.1.1
TC HRGMv2_0107_8 HRGMv2_0107_8_58 69975 70664 - 2.A.78.1.1
pfam HRGMv2_0107_8 HRGMv2_0107_8_59 70939 71988 + HTS
TC HRGMv2_0107_8 HRGMv2_0107_8_60 72085 72903 + 3.A.2.1.1
Gene ID: HRGMv2_0107_8_48
Type: CAZyme
Location: 60349 - 61905 (+)
Gene ID: HRGMv2_0107_8_49
Type: STP
Location: 61957 - 63330 (+)
Gene ID: HRGMv2_0107_8_50
Type: TC
Location: 63463 - 64368 (+)
Gene ID: HRGMv2_0107_8_51
Type: TC
Location: 64370 - 65248 (+)
Gene ID: HRGMv2_0107_8_52
Type: TF
Location: 65411 - 66481 (+)
Gene ID: HRGMv2_0107_8_53
Type: pfam
Location: 66590 - 66901 (-)
Gene ID: HRGMv2_0107_8_54
Type: TC
Location: 67003 - 68484 (+)
Gene ID: HRGMv2_0107_8_55
Type: pfam
Location: 68789 - 69259 (-)
Gene ID: HRGMv2_0107_8_56
Type: pfam
Location: 69238 - 69630 (-)
Gene ID: HRGMv2_0107_8_57
Type: TC
Location: 69643 - 69978 (-)
Gene ID: HRGMv2_0107_8_58
Type: TC
Location: 69975 - 70664 (-)
Gene ID: HRGMv2_0107_8_59
Type: pfam
Location: 70939 - 71988 (+)
Gene ID: HRGMv2_0107_8_60
Type: TC
Location: 72085 - 72903 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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