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Cluster: HRGMv2_0107_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0107_4 HRGMv2_0107_4_34 38858 39883 + GH23
TC HRGMv2_0107_4 HRGMv2_0107_4_35 40205 40906 + 3.A.1.122.14
pfam HRGMv2_0107_4 HRGMv2_0107_4_36 40916 44023 + FtsX | FtsX
TC HRGMv2_0107_4 HRGMv2_0107_4_37 44290 45675 - 2.A.40.7.2
TC HRGMv2_0107_4 HRGMv2_0107_4_38 45807 46586 - 3.A.1.7.2
TC HRGMv2_0107_4 HRGMv2_0107_4_39 46604 47704 - 3.A.1.7.2
TC HRGMv2_0107_4 HRGMv2_0107_4_40 47705 48832 - 3.A.1.7.4
TC HRGMv2_0107_4 HRGMv2_0107_4_41 48836 50365 - 3.A.1.7.2
TC HRGMv2_0107_4 HRGMv2_0107_4_42 50893 51792 - 3.A.1.3.10
TC HRGMv2_0107_4 HRGMv2_0107_4_43 51822 52658 - 3.A.1.3.4
TC HRGMv2_0107_4 HRGMv2_0107_4_44 52651 53325 - 3.A.1.3.2
TC HRGMv2_0107_4 HRGMv2_0107_4_45 53312 53965 - 3.A.1.3.10
pfam HRGMv2_0107_4 HRGMv2_0107_4_46 54167 54916 - GmrSD_C
pfam HRGMv2_0107_4 HRGMv2_0107_4_47 54916 55782 - Aldo_ket_red
TC HRGMv2_0107_4 HRGMv2_0107_4_48 56554 57249 - 1.C.82.1.1
Gene ID: HRGMv2_0107_4_34
Type: CAZyme
Location: 38858 - 39883 (+)
Gene ID: HRGMv2_0107_4_35
Type: TC
Location: 40205 - 40906 (+)
Gene ID: HRGMv2_0107_4_36
Type: pfam
Location: 40916 - 44023 (+)
Gene ID: HRGMv2_0107_4_37
Type: TC
Location: 44290 - 45675 (-)
Gene ID: HRGMv2_0107_4_38
Type: TC
Location: 45807 - 46586 (-)
Gene ID: HRGMv2_0107_4_39
Type: TC
Location: 46604 - 47704 (-)
Gene ID: HRGMv2_0107_4_40
Type: TC
Location: 47705 - 48832 (-)
Gene ID: HRGMv2_0107_4_41
Type: TC
Location: 48836 - 50365 (-)
Gene ID: HRGMv2_0107_4_42
Type: TC
Location: 50893 - 51792 (-)
Gene ID: HRGMv2_0107_4_43
Type: TC
Location: 51822 - 52658 (-)
Gene ID: HRGMv2_0107_4_44
Type: TC
Location: 52651 - 53325 (-)
Gene ID: HRGMv2_0107_4_45
Type: TC
Location: 53312 - 53965 (-)
Gene ID: HRGMv2_0107_4_46
Type: pfam
Location: 54167 - 54916 (-)
Gene ID: HRGMv2_0107_4_47
Type: pfam
Location: 54916 - 55782 (-)
Gene ID: HRGMv2_0107_4_48
Type: TC
Location: 56554 - 57249 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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