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Cluster: HRGMv2_0107_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0107_3 HRGMv2_0107_3_71 80638 82101 - 3.A.1.18.3
pfam HRGMv2_0107_3 HRGMv2_0107_3_72 82047 82781 - CbiQ
pfam HRGMv2_0107_3 HRGMv2_0107_3_73 82781 83377 - Trep_Strep
TC HRGMv2_0107_3 HRGMv2_0107_3_74 83414 85084 - 3.A.1.106.11
TC HRGMv2_0107_3 HRGMv2_0107_3_75 85086 87032 - 3.A.1.106.1
pfam HRGMv2_0107_3 HRGMv2_0107_3_76 87710 88423 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4
pfam HRGMv2_0107_3 HRGMv2_0107_3_77 88635 90902 - PIF1 | AAA_19 | AAA_30
CAZyme HRGMv2_0107_3 HRGMv2_0107_3_78 91254 92594 + GT4
CAZyme HRGMv2_0107_3 HRGMv2_0107_3_79 92673 93629 + GT2
Gene ID: HRGMv2_0107_3_71
Type: TC
Location: 80638 - 82101 (-)
Gene ID: HRGMv2_0107_3_72
Type: pfam
Location: 82047 - 82781 (-)
Gene ID: HRGMv2_0107_3_73
Type: pfam
Location: 82781 - 83377 (-)
Gene ID: HRGMv2_0107_3_74
Type: TC
Location: 83414 - 85084 (-)
Gene ID: HRGMv2_0107_3_75
Type: TC
Location: 85086 - 87032 (-)
Gene ID: HRGMv2_0107_3_76
Type: pfam
Location: 87710 - 88423 (-)
Gene ID: HRGMv2_0107_3_77
Type: pfam
Location: 88635 - 90902 (-)
Gene ID: HRGMv2_0107_3_78
Type: CAZyme
Location: 91254 - 92594 (+)
Gene ID: HRGMv2_0107_3_79
Type: CAZyme
Location: 92673 - 93629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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