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Cluster: HRGMv2_0082_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0082_5 HRGMv2_0082_5_40 56765 58444 - 3.A.1.5.23
TC HRGMv2_0082_5 HRGMv2_0082_5_41 58434 59279 - 3.A.1.5.22
TC HRGMv2_0082_5 HRGMv2_0082_5_42 59288 60256 - 3.A.1.5.38
TC HRGMv2_0082_5 HRGMv2_0082_5_43 60423 62105 - 3.A.1.5.18
pfam HRGMv2_0082_5 HRGMv2_0082_5_44 62551 63486 + SOR_SNZ | ThiG
peptidase HRGMv2_0082_5 HRGMv2_0082_5_45 63496 64095 + C26.A32
CAZyme HRGMv2_0082_5 HRGMv2_0082_5_46 64188 65951 - CBM34 | GH13_20
pfam HRGMv2_0082_5 HRGMv2_0082_5_47 66521 67291 + Pan_kinase
TC HRGMv2_0082_5 HRGMv2_0082_5_48 67331 68821 - 3.A.1.1.48
STP HRGMv2_0082_5 HRGMv2_0082_5_49 68833 70740 - SIS | SIS
TC HRGMv2_0082_5 HRGMv2_0082_5_50 70849 71670 - 3.A.1.3.24
TC HRGMv2_0082_5 HRGMv2_0082_5_51 71737 72729 - 3.A.1.3.24
STP HRGMv2_0082_5 HRGMv2_0082_5_52 72890 73816 - SBP_bac_3
pfam HRGMv2_0082_5 HRGMv2_0082_5_53 74423 74911 - SmpB
TC HRGMv2_0082_5 HRGMv2_0082_5_54 74942 76336 - 3.A.7.14.1
pfam HRGMv2_0082_5 HRGMv2_0082_5_55 76492 77415 - FtsX | FtsX_ECD
TC HRGMv2_0082_5 HRGMv2_0082_5_56 77415 78761 - 3.A.1.140.1
Gene ID: HRGMv2_0082_5_40
Type: TC
Location: 56765 - 58444 (-)
Gene ID: HRGMv2_0082_5_41
Type: TC
Location: 58434 - 59279 (-)
Gene ID: HRGMv2_0082_5_42
Type: TC
Location: 59288 - 60256 (-)
Gene ID: HRGMv2_0082_5_43
Type: TC
Location: 60423 - 62105 (-)
Gene ID: HRGMv2_0082_5_44
Type: pfam
Location: 62551 - 63486 (+)
Gene ID: HRGMv2_0082_5_45
Type: peptidase
Location: 63496 - 64095 (+)
Gene ID: HRGMv2_0082_5_46
Type: CAZyme
Location: 64188 - 65951 (-)
Gene ID: HRGMv2_0082_5_47
Type: pfam
Location: 66521 - 67291 (+)
Gene ID: HRGMv2_0082_5_48
Type: TC
Location: 67331 - 68821 (-)
Gene ID: HRGMv2_0082_5_49
Type: STP
Location: 68833 - 70740 (-)
Gene ID: HRGMv2_0082_5_50
Type: TC
Location: 70849 - 71670 (-)
Gene ID: HRGMv2_0082_5_51
Type: TC
Location: 71737 - 72729 (-)
Gene ID: HRGMv2_0082_5_52
Type: STP
Location: 72890 - 73816 (-)
Gene ID: HRGMv2_0082_5_53
Type: pfam
Location: 74423 - 74911 (-)
Gene ID: HRGMv2_0082_5_54
Type: TC
Location: 74942 - 76336 (-)
Gene ID: HRGMv2_0082_5_55
Type: pfam
Location: 76492 - 77415 (-)
Gene ID: HRGMv2_0082_5_56
Type: TC
Location: 77415 - 78761 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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