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Cluster: HRGMv2_0082_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0082_2 HRGMv2_0082_2_15 21263 22006 + 1.A.13.5.1
TC HRGMv2_0082_2 HRGMv2_0082_2_16 22072 23043 + 2.A.7.21.7
peptidase HRGMv2_0082_2 HRGMv2_0082_2_17 23090 24112 + C59.UPW
TF HRGMv2_0082_2 HRGMv2_0082_2_18 24524 25552 + LacI
TC HRGMv2_0082_2 HRGMv2_0082_2_19 25849 26832 + 3.A.1.1.18
TC HRGMv2_0082_2 HRGMv2_0082_2_20 26852 27652 + 3.A.1.1.20
CAZyme HRGMv2_0082_2 HRGMv2_0082_2_21 27675 29810 + GH43_32
Gene ID: HRGMv2_0082_2_15
Type: TC
Location: 21263 - 22006 (+)
Gene ID: HRGMv2_0082_2_16
Type: TC
Location: 22072 - 23043 (+)
Gene ID: HRGMv2_0082_2_17
Type: peptidase
Location: 23090 - 24112 (+)
Gene ID: HRGMv2_0082_2_18
Type: TF
Location: 24524 - 25552 (+)
Gene ID: HRGMv2_0082_2_19
Type: TC
Location: 25849 - 26832 (+)
Gene ID: HRGMv2_0082_2_20
Type: TC
Location: 26852 - 27652 (+)
Gene ID: HRGMv2_0082_2_21
Type: CAZyme
Location: 27675 - 29810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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