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Cluster: HRGMv2_0082_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0082_2 HRGMv2_0082_2_2 1877 2764 + 3.A.1.1.28
TC HRGMv2_0082_2 HRGMv2_0082_2_3 2764 3666 + 3.A.1.1.32
TF HRGMv2_0082_2 HRGMv2_0082_2_4 3751 4800 + LacI
CAZyme HRGMv2_0082_2 HRGMv2_0082_2_5 4850 6970 + GH36
NULL(UNKNOWN) HRGMv2_0082_2 HRGMv2_0082_2_6 7812 9161 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0082_2 HRGMv2_0082_2_7 9381 10493 + 3.A.1.2.22
TC HRGMv2_0082_2 HRGMv2_0082_2_8 10595 12169 + 3.A.1.2.22
TC HRGMv2_0082_2 HRGMv2_0082_2_9 12236 13465 + 3.A.1.2.22
Gene ID: HRGMv2_0082_2_2
Type: TC
Location: 1877 - 2764 (+)
Gene ID: HRGMv2_0082_2_3
Type: TC
Location: 2764 - 3666 (+)
Gene ID: HRGMv2_0082_2_4
Type: TF
Location: 3751 - 4800 (+)
Gene ID: HRGMv2_0082_2_5
Type: CAZyme
Location: 4850 - 6970 (+)
Gene ID: HRGMv2_0082_2_6
Type:
Location: 7812 - 9161 (+)
Gene ID: HRGMv2_0082_2_7
Type: TC
Location: 9381 - 10493 (+)
Gene ID: HRGMv2_0082_2_8
Type: TC
Location: 10595 - 12169 (+)
Gene ID: HRGMv2_0082_2_9
Type: TC
Location: 12236 - 13465 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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