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Cluster: HRGMv2_0082_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0082_1 HRGMv2_0082_1_92 114033 115559 - GH23
pfam HRGMv2_0082_1 HRGMv2_0082_1_93 116164 117105 - Thioredoxin_4
TC HRGMv2_0082_1 HRGMv2_0082_1_94 117205 118926 - 9.B.106.2.2
TC HRGMv2_0082_1 HRGMv2_0082_1_95 119280 120407 + 3.A.1.1.23
pfam HRGMv2_0082_1 HRGMv2_0082_1_96 120601 122016 + Kdo | DUF4032
pfam HRGMv2_0082_1 HRGMv2_0082_1_97 122175 122621 + RbsD_FucU
CAZyme HRGMv2_0082_1 HRGMv2_0082_1_98 123034 126915 + GH111
CAZyme HRGMv2_0082_1 HRGMv2_0082_1_99 127146 128573 + GH29
CAZyme HRGMv2_0082_1 HRGMv2_0082_1_100 128680 131832 - GH2
TC HRGMv2_0082_1 HRGMv2_0082_1_101 131936 132853 - 3.A.1.1.48
TC HRGMv2_0082_1 HRGMv2_0082_1_102 132897 133829 - 3.A.1.1.48
Gene ID: HRGMv2_0082_1_92
Type: CAZyme
Location: 114033 - 115559 (-)
Gene ID: HRGMv2_0082_1_93
Type: pfam
Location: 116164 - 117105 (-)
Gene ID: HRGMv2_0082_1_94
Type: TC
Location: 117205 - 118926 (-)
Gene ID: HRGMv2_0082_1_95
Type: TC
Location: 119280 - 120407 (+)
Gene ID: HRGMv2_0082_1_96
Type: pfam
Location: 120601 - 122016 (+)
Gene ID: HRGMv2_0082_1_97
Type: pfam
Location: 122175 - 122621 (+)
Gene ID: HRGMv2_0082_1_98
Type: CAZyme
Location: 123034 - 126915 (+)
Gene ID: HRGMv2_0082_1_99
Type: CAZyme
Location: 127146 - 128573 (+)
Gene ID: HRGMv2_0082_1_100
Type: CAZyme
Location: 128680 - 131832 (-)
Gene ID: HRGMv2_0082_1_101
Type: TC
Location: 131936 - 132853 (-)
Gene ID: HRGMv2_0082_1_102
Type: TC
Location: 132897 - 133829 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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