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Cluster: HRGMv2_0080_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0080_2 HRGMv2_0080_2_91 111626 112432 - 3.A.1.1.24
TC HRGMv2_0080_2 HRGMv2_0080_2_92 112435 113328 - 3.A.1.1.37
TC HRGMv2_0080_2 HRGMv2_0080_2_93 113401 114759 - 3.A.1.1.24
STP HRGMv2_0080_2 HRGMv2_0080_2_94 114786 115718 - PfkB
TF HRGMv2_0080_2 HRGMv2_0080_2_95 115798 116535 + HTH_DeoR
CAZyme HRGMv2_0080_2 HRGMv2_0080_2_96 116532 117899 + GH4
NULL(UNKNOWN) HRGMv2_0080_2 HRGMv2_0080_2_97 118049 118255 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0080_2 HRGMv2_0080_2_98 118258 119247 + CTP_transf_like | Flavokinase | FAD_syn
TC HRGMv2_0080_2 HRGMv2_0080_2_99 119411 121474 + 2.A.36.3.2
TC HRGMv2_0080_2 HRGMv2_0080_2_100 121476 123062 - 2.A.81.1.3
Gene ID: HRGMv2_0080_2_91
Type: TC
Location: 111626 - 112432 (-)
Gene ID: HRGMv2_0080_2_92
Type: TC
Location: 112435 - 113328 (-)
Gene ID: HRGMv2_0080_2_93
Type: TC
Location: 113401 - 114759 (-)
Gene ID: HRGMv2_0080_2_94
Type: STP
Location: 114786 - 115718 (-)
Gene ID: HRGMv2_0080_2_95
Type: TF
Location: 115798 - 116535 (+)
Gene ID: HRGMv2_0080_2_96
Type: CAZyme
Location: 116532 - 117899 (+)
Gene ID: HRGMv2_0080_2_97
Type:
Location: 118049 - 118255 (+)
Gene ID: HRGMv2_0080_2_98
Type: pfam
Location: 118258 - 119247 (+)
Gene ID: HRGMv2_0080_2_99
Type: TC
Location: 119411 - 121474 (+)
Gene ID: HRGMv2_0080_2_100
Type: TC
Location: 121476 - 123062 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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