Cluster: HRGMv2_0080_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0080
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0080_2 | HRGMv2_0080_2_52 | 62754 | 65123 | - | GT35 |
| CAZyme | HRGMv2_0080_2 | HRGMv2_0080_2_53 | 65285 | 67018 | - | GH13_30 |
| TC | HRGMv2_0080_2 | HRGMv2_0080_2_54 | 67031 | 68632 | - | 1.I.1.1.3 |
Gene ID: HRGMv2_0080_2_52
Type: CAZyme
Location: 62754 - 65123 (-)
Type: CAZyme
Location: 62754 - 65123 (-)
Gene ID: HRGMv2_0080_2_53
Type: CAZyme
Location: 65285 - 67018 (-)
Type: CAZyme
Location: 65285 - 67018 (-)
Gene ID: HRGMv2_0080_2_54
Type: TC
Location: 67031 - 68632 (-)
Type: TC
Location: 67031 - 68632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum timonense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.