Cluster: HRGMv2_0080_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0080
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0080_8 | HRGMv2_0080_8_50 | 61990 | 65250 | - | GH33 |
| NULL(UNKNOWN) | HRGMv2_0080_8 | HRGMv2_0080_8_51 | 65543 | 66358 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0080_8 | HRGMv2_0080_8_52 | 66428 | 69847 | + | GH136 |
| CAZyme | HRGMv2_0080_8 | HRGMv2_0080_8_53 | 70012 | 73650 | + | GH20 |
| TC | HRGMv2_0080_8 | HRGMv2_0080_8_54 | 74486 | 75238 | + | 2.A.89.3.2 |
Gene ID: HRGMv2_0080_8_50
Type: CAZyme
Location: 61990 - 65250 (-)
Type: CAZyme
Location: 61990 - 65250 (-)
Gene ID: HRGMv2_0080_8_51
Type:
Location: 65543 - 66358 (+)
Type:
Location: 65543 - 66358 (+)
Gene ID: HRGMv2_0080_8_52
Type: CAZyme
Location: 66428 - 69847 (+)
Type: CAZyme
Location: 66428 - 69847 (+)
Gene ID: HRGMv2_0080_8_53
Type: CAZyme
Location: 70012 - 73650 (+)
Type: CAZyme
Location: 70012 - 73650 (+)
Gene ID: HRGMv2_0080_8_54
Type: TC
Location: 74486 - 75238 (+)
Type: TC
Location: 74486 - 75238 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Species
Varibaculum timonense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.