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Cluster: HRGMv2_0080_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0080_6 HRGMv2_0080_6_44 48056 50218 + GH112
pfam HRGMv2_0080_6 HRGMv2_0080_6_45 50445 51182 + GDPD
TC HRGMv2_0080_6 HRGMv2_0080_6_46 51295 52644 + 2.A.1.52.3
pfam HRGMv2_0080_6 HRGMv2_0080_6_47 52731 53993 - FAD_binding_4 | MurB_C
STP HRGMv2_0080_6 HRGMv2_0080_6_48 54010 55032 - Sigma70_r4
TC HRGMv2_0080_6 HRGMv2_0080_6_49 55203 56024 + 1.A.8.2.1
pfam HRGMv2_0080_6 HRGMv2_0080_6_50 56078 57604 + FGGY_N | FGGY_C
peptidase HRGMv2_0080_6 HRGMv2_0080_6_51 57820 59151 - U32.UPW
TC HRGMv2_0080_6 HRGMv2_0080_6_52 59261 60199 + 3.A.1.15.8
TC HRGMv2_0080_6 HRGMv2_0080_6_53 60369 61091 + 3.A.1.15.8
TC HRGMv2_0080_6 HRGMv2_0080_6_54 61088 62044 + 3.A.1.15.8
TC HRGMv2_0080_6 HRGMv2_0080_6_55 62041 62955 + 3.A.1.15.8
TC HRGMv2_0080_6 HRGMv2_0080_6_56 62961 63893 - 3.A.1.1.48
TC HRGMv2_0080_6 HRGMv2_0080_6_57 63886 64893 - 3.A.1.1.48
TC HRGMv2_0080_6 HRGMv2_0080_6_58 65150 66445 - 3.A.1.1.48
pfam HRGMv2_0080_6 HRGMv2_0080_6_59 66633 67436 - NTP_transferase | NTP_transf_3
CAZyme HRGMv2_0080_6 HRGMv2_0080_6_60 67678 68859 + CE9
TF HRGMv2_0080_6 HRGMv2_0080_6_61 68927 69613 - GerE
pfam HRGMv2_0080_6 HRGMv2_0080_6_62 69594 71000 - HisKA_3
TC HRGMv2_0080_6 HRGMv2_0080_6_63 71133 71831 + 3.A.1.134.3
NULL(UNKNOWN) HRGMv2_0080_6 HRGMv2_0080_6_64 71832 73373 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0080_6 HRGMv2_0080_6_65 73440 74189 + 3.A.1.125.3
pfam HRGMv2_0080_6 HRGMv2_0080_6_66 74190 77006 + FtsX | FtsX
pfam HRGMv2_0080_6 HRGMv2_0080_6_67 77165 78112 - Aldose_epim | Aldose_epim
TC HRGMv2_0080_6 HRGMv2_0080_6_68 78159 79043 - 9.B.1.1.5
Gene ID: HRGMv2_0080_6_44
Type: CAZyme
Location: 48056 - 50218 (+)
Gene ID: HRGMv2_0080_6_45
Type: pfam
Location: 50445 - 51182 (+)
Gene ID: HRGMv2_0080_6_46
Type: TC
Location: 51295 - 52644 (+)
Gene ID: HRGMv2_0080_6_47
Type: pfam
Location: 52731 - 53993 (-)
Gene ID: HRGMv2_0080_6_48
Type: STP
Location: 54010 - 55032 (-)
Gene ID: HRGMv2_0080_6_49
Type: TC
Location: 55203 - 56024 (+)
Gene ID: HRGMv2_0080_6_50
Type: pfam
Location: 56078 - 57604 (+)
Gene ID: HRGMv2_0080_6_51
Type: peptidase
Location: 57820 - 59151 (-)
Gene ID: HRGMv2_0080_6_52
Type: TC
Location: 59261 - 60199 (+)
Gene ID: HRGMv2_0080_6_53
Type: TC
Location: 60369 - 61091 (+)
Gene ID: HRGMv2_0080_6_54
Type: TC
Location: 61088 - 62044 (+)
Gene ID: HRGMv2_0080_6_55
Type: TC
Location: 62041 - 62955 (+)
Gene ID: HRGMv2_0080_6_56
Type: TC
Location: 62961 - 63893 (-)
Gene ID: HRGMv2_0080_6_57
Type: TC
Location: 63886 - 64893 (-)
Gene ID: HRGMv2_0080_6_58
Type: TC
Location: 65150 - 66445 (-)
Gene ID: HRGMv2_0080_6_59
Type: pfam
Location: 66633 - 67436 (-)
Gene ID: HRGMv2_0080_6_60
Type: CAZyme
Location: 67678 - 68859 (+)
Gene ID: HRGMv2_0080_6_61
Type: TF
Location: 68927 - 69613 (-)
Gene ID: HRGMv2_0080_6_62
Type: pfam
Location: 69594 - 71000 (-)
Gene ID: HRGMv2_0080_6_63
Type: TC
Location: 71133 - 71831 (+)
Gene ID: HRGMv2_0080_6_64
Type:
Location: 71832 - 73373 (+)
Gene ID: HRGMv2_0080_6_65
Type: TC
Location: 73440 - 74189 (+)
Gene ID: HRGMv2_0080_6_66
Type: pfam
Location: 74190 - 77006 (+)
Gene ID: HRGMv2_0080_6_67
Type: pfam
Location: 77165 - 78112 (-)
Gene ID: HRGMv2_0080_6_68
Type: TC
Location: 78159 - 79043 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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