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Cluster: HRGMv2_0072_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0072_6 HRGMv2_0072_6_29 30840 31730 - 9.B.36.1.3
TC HRGMv2_0072_6 HRGMv2_0072_6_30 32306 35311 + 3.A.3.2.21
pfam HRGMv2_0072_6 HRGMv2_0072_6_31 35599 36180 - dUTPase | DCD_N | DCD_C | DCD
peptidase HRGMv2_0072_6 HRGMv2_0072_6_32 36401 37204 - S09.UPW
TC HRGMv2_0072_6 HRGMv2_0072_6_33 37885 39957 - 2.A.36.3.2
pfam HRGMv2_0072_6 HRGMv2_0072_6_34 40083 40514 + dCMP_cyt_deam_1 | MafB19-deam
CAZyme HRGMv2_0072_6 HRGMv2_0072_6_35 40749 43061 + GH36
pfam HRGMv2_0072_6 HRGMv2_0072_6_36 43245 44447 - ROK
TC HRGMv2_0072_6 HRGMv2_0072_6_37 44655 45947 + 3.A.1.1.28
TC HRGMv2_0072_6 HRGMv2_0072_6_38 45962 46897 + 3.A.1.1.28
TC HRGMv2_0072_6 HRGMv2_0072_6_39 46936 47820 + 3.A.1.1.28
CAZyme HRGMv2_0072_6 HRGMv2_0072_6_40 48222 50042 + GH13_31
Gene ID: HRGMv2_0072_6_29
Type: TC
Location: 30840 - 31730 (-)
Gene ID: HRGMv2_0072_6_30
Type: TC
Location: 32306 - 35311 (+)
Gene ID: HRGMv2_0072_6_31
Type: pfam
Location: 35599 - 36180 (-)
Gene ID: HRGMv2_0072_6_32
Type: peptidase
Location: 36401 - 37204 (-)
Gene ID: HRGMv2_0072_6_33
Type: TC
Location: 37885 - 39957 (-)
Gene ID: HRGMv2_0072_6_34
Type: pfam
Location: 40083 - 40514 (+)
Gene ID: HRGMv2_0072_6_35
Type: CAZyme
Location: 40749 - 43061 (+)
Gene ID: HRGMv2_0072_6_36
Type: pfam
Location: 43245 - 44447 (-)
Gene ID: HRGMv2_0072_6_37
Type: TC
Location: 44655 - 45947 (+)
Gene ID: HRGMv2_0072_6_38
Type: TC
Location: 45962 - 46897 (+)
Gene ID: HRGMv2_0072_6_39
Type: TC
Location: 46936 - 47820 (+)
Gene ID: HRGMv2_0072_6_40
Type: CAZyme
Location: 48222 - 50042 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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