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Cluster: HRGMv2_0072_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0072_5 HRGMv2_0072_5_50 64952 66823 - 1.A.33.1.4
pfam HRGMv2_0072_5 HRGMv2_0072_5_51 67217 68014 - AIM24
pfam HRGMv2_0072_5 HRGMv2_0072_5_52 68392 70452 - Alk_phosphatase | Metalloenzyme
TC HRGMv2_0072_5 HRGMv2_0072_5_53 70667 71605 - 2.A.102.4.6
pfam HRGMv2_0072_5 HRGMv2_0072_5_54 71866 72168 - Hydrolase_like | HAD_2
pfam HRGMv2_0072_5 HRGMv2_0072_5_55 72187 72648 - Hydrolase
CAZyme HRGMv2_0072_5 HRGMv2_0072_5_56 72995 75157 + GH77
TC HRGMv2_0072_5 HRGMv2_0072_5_57 75382 75981 + 9.B.28.1.3
TC HRGMv2_0072_5 HRGMv2_0072_5_58 76225 77067 - 3.A.1.1.45
TC HRGMv2_0072_5 HRGMv2_0072_5_59 77064 77918 - 3.A.1.1.45
TF HRGMv2_0072_5 HRGMv2_0072_5_60 78259 79269 + LacI
TF HRGMv2_0072_5 HRGMv2_0072_5_61 79528 80583 + LacI
TC HRGMv2_0072_5 HRGMv2_0072_5_62 80744 82120 - 3.A.1.1.45
CAZyme HRGMv2_0072_5 HRGMv2_0072_5_63 82193 83953 - GH13_30
TC HRGMv2_0072_5 HRGMv2_0072_5_64 84314 85660 - 3.A.1.1.45
Gene ID: HRGMv2_0072_5_50
Type: TC
Location: 64952 - 66823 (-)
Gene ID: HRGMv2_0072_5_51
Type: pfam
Location: 67217 - 68014 (-)
Gene ID: HRGMv2_0072_5_52
Type: pfam
Location: 68392 - 70452 (-)
Gene ID: HRGMv2_0072_5_53
Type: TC
Location: 70667 - 71605 (-)
Gene ID: HRGMv2_0072_5_54
Type: pfam
Location: 71866 - 72168 (-)
Gene ID: HRGMv2_0072_5_55
Type: pfam
Location: 72187 - 72648 (-)
Gene ID: HRGMv2_0072_5_56
Type: CAZyme
Location: 72995 - 75157 (+)
Gene ID: HRGMv2_0072_5_57
Type: TC
Location: 75382 - 75981 (+)
Gene ID: HRGMv2_0072_5_58
Type: TC
Location: 76225 - 77067 (-)
Gene ID: HRGMv2_0072_5_59
Type: TC
Location: 77064 - 77918 (-)
Gene ID: HRGMv2_0072_5_60
Type: TF
Location: 78259 - 79269 (+)
Gene ID: HRGMv2_0072_5_61
Type: TF
Location: 79528 - 80583 (+)
Gene ID: HRGMv2_0072_5_62
Type: TC
Location: 80744 - 82120 (-)
Gene ID: HRGMv2_0072_5_63
Type: CAZyme
Location: 82193 - 83953 (-)
Gene ID: HRGMv2_0072_5_64
Type: TC
Location: 84314 - 85660 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0072_5_51 vegan > omnivore 16.08774 0.00565
HRGMv2_0072_5_51 vegetarian > omnivore 11.71625 0.00609
HRGMv2_0072_5_62 vegan > omnivore 1.12720 0.00565

🧭 Explore Read Mapping of CGC

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