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Cluster: HRGMv2_0072_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0072_3 HRGMv2_0072_3_72 90647 91741 - 2.A.69.3.5
pfam HRGMv2_0072_3 HRGMv2_0072_3_73 91915 93729 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
NULL(UNKNOWN) HRGMv2_0072_3 HRGMv2_0072_3_74 93942 94877 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0072_3 HRGMv2_0072_3_75 95146 97413 + GH13_3
sulfatase HRGMv2_0072_3 HRGMv2_0072_3_76 97554 98048 + S1_4
TC HRGMv2_0072_3 HRGMv2_0072_3_77 98606 99172 + 2.A.107.1.2
Gene ID: HRGMv2_0072_3_72
Type: TC
Location: 90647 - 91741 (-)
Gene ID: HRGMv2_0072_3_73
Type: pfam
Location: 91915 - 93729 (-)
Gene ID: HRGMv2_0072_3_74
Type:
Location: 93942 - 94877 (-)
Gene ID: HRGMv2_0072_3_75
Type: CAZyme
Location: 95146 - 97413 (+)
Gene ID: HRGMv2_0072_3_76
Type: sulfatase
Location: 97554 - 98048 (+)
Gene ID: HRGMv2_0072_3_77
Type: TC
Location: 98606 - 99172 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0072_3_72 vegan > omnivore 4.18868 0.00565
HRGMv2_0072_3_72 vegetarian > omnivore 2.11117 0.00609
HRGMv2_0072_3_73 vegan > omnivore 3.80860 0.00565
HRGMv2_0072_3_73 vegetarian > omnivore 1.08423 0.00609

🧭 Explore Read Mapping of CGC

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