Cluster: HRGMv2_0069_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0069
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0069_3 | HRGMv2_0069_3_57 | 74107 | 74607 | + | 3.A.1.12.14 |
| NULL(UNKNOWN) | HRGMv2_0069_3 | HRGMv2_0069_3_58 | 74673 | 75872 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0069_3 | HRGMv2_0069_3_59 | 75856 | 77121 | + | Lyase_aromatic |
| CAZyme | HRGMv2_0069_3 | HRGMv2_0069_3_60 | 77319 | 79163 | - | GH13_29 |
Gene ID: HRGMv2_0069_3_57
Type: TC
Location: 74107 - 74607 (+)
Type: TC
Location: 74107 - 74607 (+)
Gene ID: HRGMv2_0069_3_58
Type:
Location: 74673 - 75872 (+)
Type:
Location: 74673 - 75872 (+)
Gene ID: HRGMv2_0069_3_59
Type: pfam
Location: 75856 - 77121 (+)
Type: pfam
Location: 75856 - 77121 (+)
Gene ID: HRGMv2_0069_3_60
Type: CAZyme
Location: 77319 - 79163 (-)
Type: CAZyme
Location: 77319 - 79163 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.