Cluster: HRGMv2_0069_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0069
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0069_2 | HRGMv2_0069_2_38 | 52596 | 53873 | + | 2.A.86.1.6 |
| STP | HRGMv2_0069_2 | HRGMv2_0069_2_39 | 54107 | 55360 | + | ACT | PALP |
| pfam | HRGMv2_0069_2 | HRGMv2_0069_2_40 | 55504 | 56001 | - | GreA_GreB | GreA_GreB_N |
| CAZyme | HRGMv2_0069_2 | HRGMv2_0069_2_41 | 56421 | 57392 | + | CE14 |
Gene ID: HRGMv2_0069_2_38
Type: TC
Location: 52596 - 53873 (+)
Type: TC
Location: 52596 - 53873 (+)
Gene ID: HRGMv2_0069_2_39
Type: STP
Location: 54107 - 55360 (+)
Type: STP
Location: 54107 - 55360 (+)
Gene ID: HRGMv2_0069_2_40
Type: pfam
Location: 55504 - 56001 (-)
Type: pfam
Location: 55504 - 56001 (-)
Gene ID: HRGMv2_0069_2_41
Type: CAZyme
Location: 56421 - 57392 (+)
Type: CAZyme
Location: 56421 - 57392 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.