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Cluster: HRGMv2_0069_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0069_10 HRGMv2_0069_10_51 65085 66377 - 2.A.1.6.6
CAZyme HRGMv2_0069_10 HRGMv2_0069_10_52 66603 67589 + GT2
CAZyme HRGMv2_0069_10 HRGMv2_0069_10_53 67665 68630 + GT2
pfam HRGMv2_0069_10 HRGMv2_0069_10_54 68692 69846 + Acyl_transf_3
NULL(UNKNOWN) HRGMv2_0069_10 HRGMv2_0069_10_55 69937 71322 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0069_10 HRGMv2_0069_10_56 71410 72285 - GT2
pfam HRGMv2_0069_10 HRGMv2_0069_10_57 72335 72712 - DUF2304
CAZyme HRGMv2_0069_10 HRGMv2_0069_10_58 72715 73458 - GT2
Gene ID: HRGMv2_0069_10_51
Type: TC
Location: 65085 - 66377 (-)
Gene ID: HRGMv2_0069_10_52
Type: CAZyme
Location: 66603 - 67589 (+)
Gene ID: HRGMv2_0069_10_53
Type: CAZyme
Location: 67665 - 68630 (+)
Gene ID: HRGMv2_0069_10_54
Type: pfam
Location: 68692 - 69846 (+)
Gene ID: HRGMv2_0069_10_55
Type:
Location: 69937 - 71322 (-)
Gene ID: HRGMv2_0069_10_56
Type: CAZyme
Location: 71410 - 72285 (-)
Gene ID: HRGMv2_0069_10_57
Type: pfam
Location: 72335 - 72712 (-)
Gene ID: HRGMv2_0069_10_58
Type: CAZyme
Location: 72715 - 73458 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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