Cluster: HRGMv2_0069_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0069
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0069_7 | HRGMv2_0069_7_63 | 90692 | 95251 | - | 3.A.7.17.1 |
| pfam | HRGMv2_0069_7 | HRGMv2_0069_7_64 | 95858 | 97045 | + | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_0069_7 | HRGMv2_0069_7_65 | 97048 | 99054 | + | GT2 |
| pfam | HRGMv2_0069_7 | HRGMv2_0069_7_66 | 99051 | 99932 | + | ABC2_membrane |
| TC | HRGMv2_0069_7 | HRGMv2_0069_7_67 | 99937 | 100710 | + | 3.A.1.103.5 |
| TC | HRGMv2_0069_7 | HRGMv2_0069_7_68 | 101193 | 102455 | + | 9.A.47.2.1 |
Gene ID: HRGMv2_0069_7_63
Type: TC
Location: 90692 - 95251 (-)
Type: TC
Location: 90692 - 95251 (-)
Gene ID: HRGMv2_0069_7_64
Type: pfam
Location: 95858 - 97045 (+)
Type: pfam
Location: 95858 - 97045 (+)
Gene ID: HRGMv2_0069_7_65
Type: CAZyme
Location: 97048 - 99054 (+)
Type: CAZyme
Location: 97048 - 99054 (+)
Gene ID: HRGMv2_0069_7_66
Type: pfam
Location: 99051 - 99932 (+)
Type: pfam
Location: 99051 - 99932 (+)
Gene ID: HRGMv2_0069_7_67
Type: TC
Location: 99937 - 100710 (+)
Type: TC
Location: 99937 - 100710 (+)
Gene ID: HRGMv2_0069_7_68
Type: TC
Location: 101193 - 102455 (+)
Type: TC
Location: 101193 - 102455 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.