Cluster: HRGMv2_0069_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0069
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0069_6 | HRGMv2_0069_6_90 | 103208 | 105013 | - | GH13_31 |
| CAZyme | HRGMv2_0069_6 | HRGMv2_0069_6_91 | 105144 | 106955 | - | GH13_31 |
| pfam | HRGMv2_0069_6 | HRGMv2_0069_6_92 | 107029 | 107907 | - | Exo_endo_phos |
| TC | HRGMv2_0069_6 | HRGMv2_0069_6_93 | 108360 | 109964 | + | 4.A.1.1.8 |
Gene ID: HRGMv2_0069_6_90
Type: CAZyme
Location: 103208 - 105013 (-)
Type: CAZyme
Location: 103208 - 105013 (-)
Gene ID: HRGMv2_0069_6_91
Type: CAZyme
Location: 105144 - 106955 (-)
Type: CAZyme
Location: 105144 - 106955 (-)
Gene ID: HRGMv2_0069_6_92
Type: pfam
Location: 107029 - 107907 (-)
Type: pfam
Location: 107029 - 107907 (-)
Gene ID: HRGMv2_0069_6_93
Type: TC
Location: 108360 - 109964 (+)
Type: TC
Location: 108360 - 109964 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.