Cluster: HRGMv2_0069_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0069
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0069_4 | HRGMv2_0069_4_102 | 117705 | 119801 | + | GT51 |
| pfam | HRGMv2_0069_4 | HRGMv2_0069_4_103 | 119839 | 120861 | + | Metallophos |
| TC | HRGMv2_0069_4 | HRGMv2_0069_4_104 | 120861 | 122891 | + | 3.A.1.106.9 |
| TC | HRGMv2_0069_4 | HRGMv2_0069_4_105 | 122891 | 124777 | + | 3.A.1.106.3 |
Gene ID: HRGMv2_0069_4_102
Type: CAZyme
Location: 117705 - 119801 (+)
Type: CAZyme
Location: 117705 - 119801 (+)
Gene ID: HRGMv2_0069_4_103
Type: pfam
Location: 119839 - 120861 (+)
Type: pfam
Location: 119839 - 120861 (+)
Gene ID: HRGMv2_0069_4_104
Type: TC
Location: 120861 - 122891 (+)
Type: TC
Location: 120861 - 122891 (+)
Gene ID: HRGMv2_0069_4_105
Type: TC
Location: 122891 - 124777 (+)
Type: TC
Location: 122891 - 124777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Micrococcaceae
Genus
Rothia
Species
Rothia mucilaginosa_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.